Package: SCIBER 0.2.1

SCIBER: Single-Cell Integrator and Batch Effect Remover

Remove batch effects by projecting query batches into the reference batch space.

Authors:Dailin Gan [aut, cre], Jun Li [aut]

SCIBER_0.2.1.tar.gz
SCIBER_0.2.1.zip(r-4.5)SCIBER_0.2.1.zip(r-4.4)SCIBER_0.2.1.zip(r-4.3)
SCIBER_0.2.1.tgz(r-4.4-any)SCIBER_0.2.1.tgz(r-4.3-any)
SCIBER_0.2.1.tar.gz(r-4.5-noble)SCIBER_0.2.1.tar.gz(r-4.4-noble)
SCIBER_0.2.1.tgz(r-4.4-emscripten)SCIBER_0.2.1.tgz(r-4.3-emscripten)
SCIBER.pdf |SCIBER.html✨
SCIBER/json (API)

# Install 'SCIBER' in R:
install.packages('SCIBER', repos = c('https://ravengan.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ravengan/sciber/issues

Datasets:
  • HumanDC - Human dendritic cell gene expression and meta data

On CRAN:

1 exports 4 stars 1.02 score 16 dependencies 9 scripts 199 downloads

Last updated 1 years agofrom:372e4117a5. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 24 2024
R-4.5-winOKAug 24 2024
R-4.5-linuxOKAug 24 2024
R-4.4-winOKAug 24 2024
R-4.4-macOKAug 24 2024
R-4.3-winOKAug 24 2024
R-4.3-macOKAug 24 2024

Exports:SCIBER

Dependencies:clidplyrfansigenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr

Quick start to SCIBER

Rendered frommy-vignette.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2023-05-02
Started: 2022-07-06